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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819618.1_cds_XP_016500120.1_13978
CDS Infomation

[gene=LOC107818596] [db_xref=GeneID:107818596] [protein=uncharacterized protein LOC107818596] [partial=5'] [protein_id=XP_016500120.1] [location=join(<2708..2868,3919..4078,5490..5582,5661..5775,5889..6057,6186..6360,6537..6662,6812..7345,7515..8126,8215..8283,10934..11050,11127..11372,13166..13213,13306..13443,14317..14481,14597..14659,14783..14890,14978..15061,16564..16611,17047..17121,18076..18171,18256..18336,18441..18512,18970..19014,19082..19165,20090..20193,20277..20421)] [gbkey=CDS]
Sequence

GCTGCCAAGTTCGCTTCCGATGTTCCGTCGAAGCTTCACAGCTTGCGCCGGTTAAATAAT
GAACTCGCCGGCGCCGACTCTCAGTTGCTCTCTGAATTCCTCCCTTCTCTCCTTGACCTC
GTATCTGATCGGTTTAGCCCTGTTCGTAAATTAACCGCTGAGATGGTTGGTTATATTGGA
TTCAAACACGGAGAATTCATACCTGATATTGTACCCGTATTGATCTCTGCCTTGAAGGAT
GATACCCCAGCTGTTGCTCGACAAGCAATCACTTGTGGAATTGATATATTTCGGTGTACT
CTAGTCAAAGTTGCAATCCAGGGCTTGTTTTCAAGTGAATTGGATGATTCTCTTGAATCA
GCATGGGCCTGGGTGCTGAAGTTTAGGGAGGAGATATACACAATGGCATTTCAGCCTGCA
AGTGATGGAAGAAGATTGCTTGCGCTAAAGTTCGTGGAATCTGTTGTGTTACTTTACACT
CCGAATCCTAGTGTCAGTTCGGAGCCACCGCCTGCTTTGGACATTGAAGGGAAGTTTGAA
CAATTCAATGTTTCGTGGCTTCGTGGAGGTCATCCAATGCTAAATGTTGGGGATTTGTCT
GTTGAAGCAAGTCAAAGTTTGGGTCTATTGCTTGATCAGCTTAGATTTCCTGCGGTGAAG
TCAATTACTTGCTTGATGATCATTGTGCTCATTAACTGTCTTTCAGCAATTGCGACTAAA
AGGCCGGCTTTTTATGGTCGTATTCTGCCAGTTCTGCTTAGCCTGAATCCTTCAAGCTCC
GACGGTAATGAGAAGCATGTTTCTGGGGTATACCATGCTTTGAAGAATGCCTTTGTTTCT
TGCTTGAATTGTACACACCCAGGAGCTGCACCGTGGCGGGACAGACTAGAAGGTGCACTC
AGAGAAAAGAGAGCAGGAGTTCAAGCAGAACCAGTTGTAAGCCACGATTCCCAGAATAAT
GGACATGTAGAGTTGAAGGATGTTTCATCAATCCCAGAGGAGTCAAAGCCTTCAGTTAAA
GCATCGGATAGTGGACAAAGCATTGCTGGAACGAAAAGATCAGGGGTGGAGGACAATGCT
GAACTGGTAGATGATAATCTCTCTAAGAAGCGCATGCGGGCGGCACCTATTGTCTTAAAG
GAACCAAAACAAGAGCTAAGTGCGAACCAGGAGAGAGTTTCAACTGGAGGTTCTACAACA
ACCAGATCAGATGGAGATAATGTTCATTTGCAACCACTTGTTGCAATGTTTGGTACATTA
GTTGCCCAGGGTGAAAAGGCTGCAGCATCATTGGATATTTTAATCTCTAGCATATCAGCT
GACTTACTAGCTGATGTTGTGATGGCTAATATGAGAAATCTACCTTCGAATCAGCCAAAA
GTTGATGATGATGAAGAGCCACCTCTGAAGCCAGAAATTGAATCTGATTTTAAACAATTG
TCATCACTGTTGTCAGACGTCGTTTCTCAGTCCAGTATGTTAGCAGAAAAAGGCGAGAAA
TATGCTCAAAATTTGGTCTCCATCGAGCTGGAGTTGCAGCAAATTAAAGAAGGAGACGAG
CACCTTGATTCTGTCACTACTAATGTTTCATCTGATGCCCTAAATTATGCAAGCGAACAA
GCACCGGAATATGTAACTGAACCTCTTTCTTCAAAAAGTACCCCTCTACTCATGGAGAAT
GATGTCTCAGCAATGCAATCTGATGTTGCTGACATTGAAAACACTGAGGATTTCATACCT
GGTCTAGATTCTGTAGTTCGCAAAGATGAATCATCAGAGCTCATAGTTGTTTCATCAGTT
GATCCCGCTGAACTTGAGGATGGGAGCCAAGAGCAAGGGTCTAGTTTAGTGAGGTCATCT
TTGGAGGTAGTTCCATCGATTTCAACTGATAGGTCTGAGGAGCTTAGTCCAAAAGCAGCA
GTAACAGATGTAACCAGCGTAAACTCATCAATGGCAGCTTCTGTTGGGCTTTCTCCGCAG
TTGCTTCTACCCAAAATATCTGCTCCAGTCATCCACCTACCTGACGAACAGAAGGATAAT
ATACAAAAGTCAGCTTTCACTCGTGTCATTGATGCTTATAAGCAAGTTACAGTTGCTGGA
GGTTCTCAAACCCGCTTTTCTCTTCTTGCCTATTTAGGTGTTGAGTTTTCTTCGGAGCTA
AACCCTTGGAAATTTCTACAAACACATATATTGTCAGATTATGTGAATCATGAGGGGCAC
GAGTTGACATTGCGTGTCCTCTACAGGTTGTATGGGCGTGCAGAAGAAGACCAGGATTTC
ATTTCTTCAACAGCTGCTGCATCTGTATATGAAACATTTCTACTTACAGTGGCAGAAACA
CTTAGAGATTCTTTTCCAGCTTCTGACAAATCTCTAAGTAGATTGCTTGGTGAAGCTCCT
CACTTACCAAATTCTGTTCTCAAGTTGTTAGAGAGCTTCTGTTGTCCTGGTAGTTCTGAA
AAGGATGAGAAGGATTTACATAGTGGAGATCGAGTCACTCAAGGCCTCAGTACTGTGTGG
AACCTGATTCTGATGAGACCTCCAATGAGAGAGGCCTGTCTCAGAATTGCTTTACAGAGT
GCTGTTCATCACTTGGAGGAGGTGCGCATGAAGGCAATACGGCTGGTCGCCAACAAGCTT
TATCCTCTGACATTCATCTCTCAACAAATAGAGCACTTTGCCAATGAAATGTTGATGTCA
GTTTCAACCGTTGATCATAAAGCAGACTCAAATGGTGATGGATCTAATCCTGCATTGCAG
AAGGATTCTGCTTCAGAGAAACCCACGGAAGAAGGACCATCATTTTCTATCACCACCAAA
GATGTGTCCTCTGACACTCTTCAGTCATCCACTGCTGGAAGCATATCACCGTTTTTGATA
GCTGAAGGCCAGCGGTGCATGTCGCTCTATTTTGCACTCTGTACTAAGAAGCACTCACTT
TTTGGCCAAATATTTGTTGTATATAGTCGTGCATCCGAGGCTGTACAGCAGGCAATACAT
CAACAAATCCATATGCTAGTTCGGACAATTGGTTCTTCATCTGAGCTACTTGAGATCATA
TCAGATCCACCAAGTGGAAGTGAAAAGCTATTGATGCAGGTTTTGCAAACGTTGACCGAG
GGGACAGTTCCTTCCTTACAACTGATAACTACAATCAGGAAGCTATATGAGACTAAAGTA
AAGGATGTTGAACTTCTTATTATGATACTTCCTTTCCTGTCAAAAGACGAGGTTTTGCTG
CTTTTCCCACATGTTGTGAATGTTCCATTGGATAAATTCCAAGGTGCTCTCTCTCGTATT
CTACAGGGATCAGCTCACTCAGGTCCAGTGCTAACTCCTGCTGAAGCATTAATTGCTATC
CATAGGATTGATCCTGAAAGAGAAGGCATTCCATTGAAGAAGGTCACAGATGCATGCAAT
GCTTGTTTTGAGCAGAGACAGACGTTCACGCATCAGGTTCTTGCAAAGGTCTTGAACCAA
TTGGTTGAACAAATTCCTCTTCCGTTGCTGTTCATGCGGACTGTAATACAAGCTATTGGT
GCTTTTCCATCTCTGGTGGATTTCATAATGGAGATCCTCTCTCGTCTTGTTAGTAAGCAG
ATATGGAAATACCCGAAGCTGTGGGTAGGATTTGTGAAATGTGCCCTTTTGACCAAGCCA
CAATCTTTTGGAGTGCTGCTTCAGCTTCCTCCAGCTCAGCTTGAAAATGCATTGAGTAGA
ACACCTGGTCTCAGAGCTCCTTTAGTTGCACATGCAAACCAACCACACATAAAATCTTCA
CTTCCAAGGTCTGTCTTAACGGTTCTTGGAATTGAATCGGATGCTCAAGGTTCAAGTCAG
GCACCTCCCAACCAGTCTCAGACAGGTGATATGGGCAATTCTGATAAGGAGGCACTCGCT
GAGAAACCCAGGGAATCGTCAATTGCCAGTTAA

Peptide Sequence

PEP ID

XP_016500120.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107818596, partial [Nicotiana tabacum]
Sequence

AAKFASDVPSKLHSLRRLNNELAGADSQLLSEFLPSLLDLVSDRFSPVRKLTAEMVGYIG
FKHGEFIPDIVPVLISALKDDTPAVARQAITCGIDIFRCTLVKVAIQGLFSSELDDSLES
AWAWVLKFREEIYTMAFQPASDGRRLLALKFVESVVLLYTPNPSVSSEPPPALDIEGKFE
QFNVSWLRGGHPMLNVGDLSVEASQSLGLLLDQLRFPAVKSITCLMIIVLINCLSAIATK
RPAFYGRILPVLLSLNPSSSDGNEKHVSGVYHALKNAFVSCLNCTHPGAAPWRDRLEGAL
REKRAGVQAEPVVSHDSQNNGHVELKDVSSIPEESKPSVKASDSGQSIAGTKRSGVEDNA
ELVDDNLSKKRMRAAPIVLKEPKQELSANQERVSTGGSTTTRSDGDNVHLQPLVAMFGTL
VAQGEKAAASLDILISSISADLLADVVMANMRNLPSNQPKVDDDEEPPLKPEIESDFKQL
SSLLSDVVSQSSMLAEKGEKYAQNLVSIELELQQIKEGDEHLDSVTTNVSSDALNYASEQ
APEYVTEPLSSKSTPLLMENDVSAMQSDVADIENTEDFIPGLDSVVRKDESSELIVVSSV
DPAELEDGSQEQGSSLVRSSLEVVPSISTDRSEELSPKAAVTDVTSVNSSMAASVGLSPQ
LLLPKISAPVIHLPDEQKDNIQKSAFTRVIDAYKQVTVAGGSQTRFSLLAYLGVEFSSEL
NPWKFLQTHILSDYVNHEGHELTLRVLYRLYGRAEEDQDFISSTAAASVYETFLLTVAET
LRDSFPASDKSLSRLLGEAPHLPNSVLKLLESFCCPGSSEKDEKDLHSGDRVTQGLSTVW
NLILMRPPMREACLRIALQSAVHHLEEVRMKAIRLVANKLYPLTFISQQIEHFANEMLMS
VSTVDHKADSNGDGSNPALQKDSASEKPTEEGPSFSITTKDVSSDTLQSSTAGSISPFLI
AEGQRCMSLYFALCTKKHSLFGQIFVVYSRASEAVQQAIHQQIHMLVRTIGSSSELLEII
SDPPSGSEKLLMQVLQTLTEGTVPSLQLITTIRKLYETKVKDVELLIMILPFLSKDEVLL
LFPHVVNVPLDKFQGALSRILQGSAHSGPVLTPAEALIAIHRIDPEREGIPLKKVTDACN
ACFEQRQTFTHQVLAKVLNQLVEQIPLPLLFMRTVIQAIGAFPSLVDFIMEILSRLVSKQ
IWKYPKLWVGFVKCALLTKPQSFGVLLQLPPAQLENALSRTPGLRAPLVAHANQPHIKSS
LPRSVLTVLGIESDAQGSSQAPPNQSQTGDMGNSDKEALAEKPRESSIAS

Transcript Sequence

Gene sequence data has not been registered.